Vulnerability Assessment of Geo-ecosystems

12 EC

Semester 1, period 1

5264VAG12Y

Owner Master Earth Sciences
Coordinator dr. Harry Seijmonsbergen
Part of Master Earth Sciences,

Course manual 2021/2022

Course content

Due to the ongoing Covid-19 pandemic, the content of the course has changed. This years fieldwork abroad has been cancelled by the 'core team education' of the faculty, due to the insecure developments and measures, both in the Netherlands and  Spain/including the Spanish islands. In the light of logistics, arrangements and preparations, a visit abroad was not possible.

Instead, we will have 8 days field work on Texel island and two excursions and in the Netherlands (see the DataNose and the lectures for the exact dates). This years focus  will be on : 

  1. Geodiversity, landscape and  ecological heterogeneity. We will discuss landscape evolution theories, Land Use & Land Cover change, vulnerability, habitat structure and discuss and apply field inventories (e.g. using LiDAR data) and investigate soil/vegetation interactions and the role of landforms.
  2. Vulnerability assessment along geo-ecological gradients, effects of changing land use and land cover, erosion and accumulation,  vegetation succession and competition among plant species, role of invasive species and  the influence of climate change.
  3. Impact of Land Use and Land Cover Change: soil erosion and recovery, vegetation succession and competition with (introduced) plant species, multi-temporal remote sensing analysis, coastal development, multi-scale and multi-criteria analysis of societal and environmental indicators for future landscape development, assessment of the socioeconomic drivers and impacts related to land use change.
  4. Sustainable water management: hydrological stress factors in the landscape, services and their impacts for nature conservation and restoration, suitability mapping, water quality and geo- and ecosystem services.
  5. Geodiversity and ecosystem services of cultural landscapes in the Netherlands. Historical, current and future directions, e.g. rewilding in conservation management.

Course set-up:

Theoretical information from lectures (staff and guest lectures), a literature study and preliminary GIS and remote sensing data analyses will be used to formulate and communicate research objectives and accompanying research questions that fit into one of these central research themes. The Dutch research template of the Netherlands Organization for Scientific Research (NWO)  will be used to write a  proposal that includes; an attractive title and general information of the applicants, a scientific summary, a summary for the general public, the experimental design, a complete description of the proposed research, a time table of the project, the scientific embedding of the project, knowledge utilization, budget and a final statement by the applicants. See the detailed NWO template on the Canvas site for details. Students will gain field experience during two one-days field visits  in Rhenen (Veluwe area), Oostvaardersplassen (reclaimed land, central NL). There will be opportunity to test theory against reality.

Introductory assignments will be available to evaluate the geodiversity of Texel using digital datasets, such as 1:50 .000 geological, geomorphological and soil maps, as well as high resolution elevation data derived from LiDAR.

The proposal will be elaborated to a report, that includes the findings of a short 8 days fieldwork on Texel island and related analyses (spatial analyses, lab work, models). Each student group (3 students) will work in a specific area and on a selected topic that fits this years themes. These topics will be discussed during field visits in the first two weeks of the course. Students can test the feasibility of their proposal, especially the research goals and questions, the experimental design during a short field inventory. They will take soil samples and collect field measurements to support their final report and the accompanying technical log. This field-based case study, including lab results, maps and other measurements/analysis will be integrated into a final report and accompanying technical log.

After fieldwork students can work in the laboratory to process their soil samples, work in the GIS-studio to analyze spatial relations and/or conduct other software-related analyses that support the final proposal.

In a separate technical log all data, models and metadata descriptions will be included. The proposal and the final report are  presented during before the fieldwork and in the last week of the course (see dates and deadlines).

All procedures, templates/assessment rubriks and tutorials are published on Canvas and discussed during lectures, discussion meetings and in the field.

In addition, this course informs on the structure of the Master Earth Sciences, which includes:

  • An overview of the elective and mandatory courses of the master.
  • A presentation of the  research groups involved and their main research topics.
  • A workshop to guide you with the choices you can make in the master, this Personal Education Program form  has to be filled out at the end of the course.

Study materials

Literature

  • Selection of research articles,  short PowerPoint-presentations and hand-outs will be published on Canvas

Syllabus

  • A short excursion guide will be handed out before the field visits to Rhenen and Oostvaardersplassen and the field work on Texel.

Practical training material

  • GIS and RS basic exercises are available from Canvas; assignments on geodiversity will be available on Canvas; ArcGIS Pro will be available for installation on own laptops

Software

  • ArcGIS Pro

Objectives

  • Acquire theoretical and practical experience of geo-ecological problems and management from an earth and ecological science perspective along geo-ecological gradients
  • Design a field sampling /modelling strategy; Describe and interpret field observations using standardized templates, GIS, modelling and statistical techniques
  • Acquire skills for writing a research proposal using an adapted template of the Dutch Organization of Science (NWO)
  • Facilitate the integration of the first year master student population in the Earth Science master curriculum

Teaching methods

  • Fieldwork/excursion
  • Presentation/symposium
  • Self-study
  • Supervision/feedback meeting
  • Lecture
  • Computer lab session/practical training
  • ~8 lectures - provide a theoretical earth science framework of Texel and its ecosystem services
  • Self study: literature review, writing, labwork, spatial analysis and more
  • (GIS) labs (~15 half a day sessions throughout the course) that include spatial analyses related to fieldwork, geodiversity, GIS ands RS skills
  • Excursion to Rhenen (1 day) and Oostvaardersplassen (1 day)
  • Excursion and fieldwork on Texel island (8 days),  including a closing pitch and evening discussions
  • Presentations I and II (~15-20 min. per team) of proposal and final report
  • Presentations by heads of the Earth Science chairs about current research structure and topics and by individual lecturers on courses in the Earth Science master (max. 2x 2 hrs)
  • 1 hour workshop on possibilities and selection of your study programme in the master Earth Science

Precise activities will be published on the Canvas digital learning environment before and/or in the first week of the course.

In August it will officially be decided whether all activities will take place on campus or that (part of) the program will be offered online.

Learning activities

Activity Contact hours Activities for students  
Lectures  (12) 24 Get inspired, informed, curious, get ideas and experience links between research topics, relevant for the design of an innovative and interesting research proposal  
Practical (14) 56 Use this time to support your deliverables (practical work and proposal) with digital data of your area by collecting / analyzing digital information. Use GIS and remote sensing techniques for some basic technical procedures (clipping, masking, digitizing, printing various maps etc.). Examples available on Canvas.  
Presentation I and II 4 Team presentation using PowerPoint to communicate your literature review and your proposal to fellow students and staff  
Excursions/fieldwork (in total 10 days) 80 Practical field experience to relate geodiversity, ecosystem services and landscape management in contrasting environments (Rhenen, Oostvaardersplassen, Texel)  
Self study (writing, reading) 172 Time around all other activities for literature review, preparing your deliverables (reading, (re-)writing, lab-work, analyses using computer/statistical software/models etc.)  
Total 336     

Attendance

Requirements of the programme concerning attendance (OER-B):

  1. Attendance during practical components exercises is mandatory.

Additional requirements for this course:

During the course you will be working in a team of three students. Diversity in background and experience of the team will ensure that skills and knowledge necessary for successful completion of  this course are available. We encourage  team composition of at least one Dutch student and one foreign student. Also, it would be great to have students of various track interest (EM, FPES and GED) mix in a team.

Assessment

Item and weight Details Remarks

Final grade

All partial grades should be 5 or higher. Mean should be 5.5 or higher

25%

Proposal

5%

Presentation I

20%

Fieldwork

10%

Presentation II

40%

Final report (20%) and technical log (20%)

Evaluation criteria / grading information will be published on the Canvas Learning Environment. For each type of assignment (presentation, excursion/fieldwork, practical report) we use rubriks for assessment. These will be published on Canvas.

Deadlines - hand in via the Canvas digital learning platform:

1. Hand in  Presentation I:                           Thursday  23/9 via Canvas

2. Hand in Proposal:                                       Monday 27/9  per email for review; 30/9 via Canvas

3. Fieldwork:                                                      Friday 8/10, no hand in required

4. Hand in Presentation II:                           Friday 28/10, via Canvas

5. Hand in Final report/ technical log:    Friday 29/10, via Canvas

Inspection of assessed work

The manner of inspection will be communicated via the digitial learning environment.

You will receive individual and / or group-wise feedback on each of the grading components using  rubriks . You will receive an invitation for the evaluation of the final grading.

Assignments

Literature review

  • Not graded - should be handed in as 2 page review.

    A team of three students write a short literature review of 2 pages.  The topic is based on your research topic (can be selected from available topics, which wil be posted via a Google Document on Canvas), the formulated research objectives and research questions. Guidelines and procedures will be explained - peer review by students (see under Proposal). 

Proposal

  • Graded - see Assessment

    A research proposal related to the main course topics and Texel island is prepared by the team, and meets the standards of the NWO format (will be available on Canvas). Feedback on ideas and progress  is provided by staff during the first four weeks, mainly during discussion sessions. The two page literature view from the Literature review assignment will be integrated in this Proposal. The concept proposal will be reviewed by other student teams, feedback is provided during the presentation I after which the Proposal will be handed in, see deadlines. A rubrik with evaluation criteria, will be posted  on Canvas.

Presentations I and II

  • Both graded - see Asessment

    Presentation I:

    Student teams present their proposal, including their findings of the literature review.  Feedback will come from staff and students (the audience)

     

    Presentation II:

    Students present and 'defend' their final report, that includes the updated proposal and the fieldwork results.

    Feedback will come from staff and students (the audience)

     

    See rubrik for evaluation criteria, which will be posted on Canvas.

Final report and technical log

  • Graded - see Assessment

    Student teams write their final proposal, which is based  on the first proposal and the experience and results of the fieldwork, laboratory analysis and spatial analysis related to the Texel fieldwork.

    The proposal is supported by digital data, such as maps, tables and/or other supporting materials. See rubrik for evaluation criteria. Instructions and examples will be posted n Canvas.

Fieldwork

  • Graded - see Assessment

    The Texel fieldwork will be evaluated directly after the field period. Teams will receive continuous feedback during the fieldwork and during the closing pitch, by students and staff. See rubrik for evaluation criteria. Professional behavior is part of the assessment.

Fraud and plagiarism

The 'Regulations governing fraud and plagiarism for UvA students' applies to this course. This will be monitored carefully. Upon suspicion of fraud or plagiarism the Examinations Board of the programme will be informed. For the 'Regulations governing fraud and plagiarism for UvA students' see: www.student.uva.nl

Course structure

Week nr. Activities Hand in assignments Deadline
36 lectures / discussions, practical, master info, self study (lit. review, GIS)    
37 Zoom lectures, practical, master info, self-study (lit. review, GIS), Rhenen field visit    
38 Lectures, practical, self-study (lit. review, GIS), presentation I, field visit Oostvaardersplassen Presentation I  September 23 via Canvas
39 Practical,  fieldwork Texel island Proposal (September 27 for review per email, September 30 via Canvas)
40 Fieldwork Texel island Fieldwork + pitch October 8 - no hand in
41 Continuation lecture, self study (GIS, labwork), question hour    
42 Self study, Lab/GIS, study plan, question hour    
43 Self study, presentation II Final report + technical log; Presentation II October 29 via Canvas

Timetable

The schedule for this course is published on DataNose.

Additional information

This year's course has a different structure as the result of the ongoing effects of the COVID-19 pandemic.  Regulations from national and local authorities may change from time to time - therefore the program can potentially differ from the information presented in this manual - if necessary, announcements will be posted via Canvas or in person.

We will remain in the Netherlands and have two  one-days excursions to Rhenen and to the Oostvaardersplassen, as well an 8-days fieldwork on Texel island (see schedule on DataNose, this course manual and announcements). Housing and meals have been arranged. Travel to and from the excursion sites and fieldwork is your own responsibility, locations will be announced via the Canvas page, as well as additional information.

The students that enrolled in this course will receive practical information about the final content and set-up  of the course via email or via an announcement on digital learning environment Canvas before the third week of August.

Knowledge of earth sciences and basic GIS knowledge are  both helpful; contact the coordinator in the week before the start of the course for updating or refreshing of these issues. This is not mandatory; you will be part of a group of students with various skills, that, in combination, are well prepared for this course.

Contact information

Coordinator

  • dr. Harry Seijmonsbergen

Staff

  • Harry Seijmonsbergen (coordinator)
  • Kenneth Rijsdijk (lecturer, fieldwork)
  • John van Boxel (lecturer)
  • Erik Cammeraat (fieldwork)
  • Gerard Oostermeijer (lecturer)
  • Dr. A.M. Kooijman (lecturer, fieldwork)
  • William Gosling (master info)
  • Astrid Groot (master info)
  • Boris Jansen (master info)
  • Emiel van Loon (master info)
  • Judy Shamoun-Baranes (master info)
  • Franciska de Vries (master info)
  • Albert Tietema (master info)
  • Rutger van Hall contact laboratory)
  • Franziska de Vries  (master info)